CDS

Accession Number TCMCG065C26978
gbkey CDS
Protein Id XP_022685091.1
Location join(<234250..234614,234739..234798,235596..235712,235845..235964,236083..236224,236318..236494,236563..236916,237022..237443,237532..237655,237768..238019)
Gene LOC101785473
GeneID 101785473
Organism Setaria italica

Protein

Length 710aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_022829356.1
Definition LOW QUALITY PROTEIN: probable rhamnogalacturonate lyase B, partial [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category S
Description Polysaccharide lyase family 4, domain III
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
AACAAGCTGCTAGCTACGAGACCTTCCCGCCCAACGTCGTCGTCAAGTCATGCATCGTCCGTTCAGGGCGCACTAACAAGTGCACCGCGCGCGTACCACGACTGCCCGGCGTCTGCGTGCCGGCCGGCCGGGCTTGGCCTGCCTCTACTACAAATCTCTTACCTCTCCGATCCTTTTCTTCAATCTCTTACCTCTTCTTCTTCTTCCTCCTCCTCCTCGATCGCCATTTGTGCATGCATACAGGTGCTCGTGGACAATGGCGTGGTGCAGGTGACGCTGTCCAAACCGCAGGGCCACATCACCGCCGTCGGCTACAACGGCGAGCGCAACCTGCTGCACTACGCCGGCCAGGAGAACTCGGGAGGGTACCGGGATGTGGTGTGGAACTATCCCGGCTCCGATCACCCAAGAGGGATGATCGACATGTTGGACAGTACAGAGTTCAAGGTCATATCCTCAAGCCAGGAGCAAGTGGAGCTTTCTTTCAGGAGTACATATAACCCATCATGTCAAGATAGTGTTCGGCTCAACATTGACAAGAGACTTGTGATGCTGAAAGGCAGCTCTGGGTTCTACTGCTACGCCATCTTTGAGCACACCAGCAACTGGCCTGCCATGAACATCTCAGAGGCTCGGCTCGCTTTCAAACTAAACACGGACAAGTTCAACTACATGGCGATTTCAGACGACATACAAAGATACATGCCCAGCGCGGCAGACAGAGACGAGCCTCGAGGCACTGCACTGGCCTACAAGGAGGCTGTTCTTCTCGTTAACCCTGAGGAGCCACAGTTCAAGGGAGAGGTGGATGACAAGTACCAGTACTCGCTGGACAACAAGGACAACGTCGTCCATGGATGGATCAGCAGCAATCACCCCAACCCCATGGGCTTCTGGGTCATCACCCCCAGCAACGAGTTCAAGAGCGGCGGCCCCATGAAGAGGGAACTCACCTCCCACGTCGGACCCACCTCCCTCACTATGTTTCTGGGAACGCATTACATTGGGGATGACATTGTCCTCAACATCGGCGGTGGCGAGTATTGGAAGAAGGTGTTGGGGCCAGTCTTCATCTACCTCAACTCGAGCCCGAAACACGGTGATCTCCGGGCTCTCTGGCAGGATGCCAAGGCGCAGGCGCAAACCGAAGTCAGCAAGTGGCCGTACAGCTTCCCTAAATCACCGGACTTCGCCAAGGCCGGCAAGAGGGGCTCCGTCACCGGAAGGCTCATGGTCAGAGACAGGTTCATGAGGAAGGACGACATGCCTACCCGGATGGCGTACATCGGCCTCGCCGCGCCCGGGCAGCCTGGCTCCTGGGCGACAGAGTGCAAGGGTTATCAGTTCTGGACGACGGCCACGTCCTGCGGCAGTTTCACCATTGGCAATGTCCGGGCAGGGGTGTACAACCTCTACGCATGGGTCCCCGGGGTTCTTGGAGACTACATGTACACTTGTGCTGTGACCGTAACGCCAGGTTGCGCCATCGACCTCGGTGATCTCGTGTTCTTGCCTCCAAGATCAGGCCCGACGCTGTGGGAGATCGGAGTCCCGGACGGGACCGCCGCGGAGTTCTTCATTCCTGACGTCGACCCCAGATACGCCAACCGGCTGTTTCTGCACAGGGAAAAGTAAGCTCTTCATCTTTGATGGCTTACGGAAGCATATGGCACGAGGCTGTACCCTGACAGCGATCAGAGCCTCACGGTCGGTCAGAGCGACCACTCCAAGGACTGGTTCTTTGCGCATGTCACAAGGAAGTTAGGCAATGGCAACGTGCCAGCAACGCGTCAGATAAGGTTCAACCTGGACCACGTCGTCGCGGACGGCACCTACACGCTGCGCATCGCCCTTGCAGCTGCTCAGATGTCCAGACTGCAGGTGCACGTGAACGGGGGCGGGTTGTTCACGACGCCGGAGTTCGGCGGCGGCAACGCCATCGCGCGGCACGGCATCCACGGCGTGCAGTGGAGCTTCGAGTTCCCAATCAGGGGGTACCTGCTGCAGGAAGGCGAGAACAGGTTGAGCATCACGCAGAGCAGGGCCTTTGGCGAGTTCTTGGGGGTCATGTACGACTACATCCGCCTGGAAGGACCTCCCGGATCCTGGCGAGACCCCACGCGACGGCCATGA
Protein:  
NKLLATRPSRPTSSSSHASSVQGALTSAPRAYHDCPASACRPAGLGLPLLQISYLSDPFLQSLTSSSSSSSSSIAICACIQVLVDNGVVQVTLSKPQGHITAVGYNGERNLLHYAGQENSGGYRDVVWNYPGSDHPRGMIDMLDSTEFKVISSSQEQVELSFRSTYNPSCQDSVRLNIDKRLVMLKGSSGFYCYAIFEHTSNWPAMNISEARLAFKLNTDKFNYMAISDDIQRYMPSAADRDEPRGTALAYKEAVLLVNPEEPQFKGEVDDKYQYSLDNKDNVVHGWISSNHPNPMGFWVITPSNEFKSGGPMKRELTSHVGPTSLTMFLGTHYIGDDIVLNIGGGEYWKKVLGPVFIYLNSSPKHGDLRALWQDAKAQAQTEVSKWPYSFPKSPDFAKAGKRGSVTGRLMVRDRFMRKDDMPTRMAYIGLAAPGQPGSWATECKGYQFWTTATSCGSFTIGNVRAGVYNLYAWVPGVLGDYMYTCAVTVTPGCAIDLGDLVFLPPRSGPTLWEIGVPDGTAAEFFIPDVDPRYANRLFLHREKXALHLXWLTEAYGTRLYPDSDQSLTVGQSDHSKDWFFAHVTRKLGNGNVPATRQIRFNLDHVVADGTYTLRIALAAAQMSRLQVHVNGGGLFTTPEFGGGNAIARHGIHGVQWSFEFPIRGYLLQEGENRLSITQSRAFGEFLGVMYDYIRLEGPPGSWRDPTRRP